LIST OF SELECTED PUBLICATIONS:
My up-to-date papers via NCBI link:
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Download my papers via ResearchGate:
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Vew my citations via Google Scholar:
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LECTURES, LABORATORY COURSES AND SEMINARS:
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Lectures in Basic Bioinformatics
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Lectures in Bioinformatics Analysis
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Lectures in Programming in Bioinformatics
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Lectures in small RNAs and NGS data analysis
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RESEARCH MEETINGS, CONFERENCES AND FELLOWSHIPS:
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2004-2005 Marie Curie fellowship, in M.Tabler's lab at Institute of Molecular Biology and Biotechnology, Crete, Heraklion, Greece
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2004 International training workshop in Bioinformatics, Sept. 13-18, Heraklion, Crete, Unesco, Venice Of-fice.
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2004 International training workshop - Onassis Lectures in Biology: Genomics, Bioinformatics and beyond.
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2005 International training workshop in Bioinformatics, Sept. 5-10 Sofia, Bulgaria, Unesco, Venice Office.
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2006 International training workshop in GRID systems, "BG induction to GRID Computing and EGEE pro-ject"
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2008 "Plant Genomics European Meeting" (Plant GEM),September 24th-27th 2008 in Albena, Europe, Bulgaria.
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2009 "miRNA Europe Meeting" 2-3 November , Cambridge UK
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2010 EMBL, Non-coding genome conference", Heidelberg, Germany
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2011 RNA society, 16th annual meeting, RNA 2011, Kyoto, Japan
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2012, Abiotic stress conference, Vienna
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2012 Training School "Next generation sequencing data analysis with Chipster", Helsinki, Finland
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2012 "Next Generation Sequencing: What´s next?", Uppsala, Sweden
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2012 AllBio meeting, Milan, Italy
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2013 The Next NGS Challenge Conference, Valencia, Spain
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2014 "NGS Data after the Gold Rush" & COST Management Committee Meeting, Norwich, UK
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2015 "Next Generation Sequencing: a look into the future", Bratiskava, Slovakia
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2015 Kick-off meeting EU COST Action member FA1407, Brussels, Belgium
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2016 EU COST Action meeting FA1407, France, INRA Versaille
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2017 EU COST Action FA1407, WG meeting, Czech Republic
CONFERENCE ORGANIZATION:
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2012 BIOCOMP BG "International Conference on Bioinformatics and Computational Biology" 20-21 Sept., Varna, Bulgaria
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2014 "NGS and non-coding RNAs data analysis", COST EU workshop, 15-16 May, Plovdiv, Bulgaria
SCIENTIFIC INTERESTS:
Development of new methods, algorithms and computational softwares for exploring and interpreting genomic data in a framework of automated sequence analysis. Our current emphasis is on the small RNAs (microRNAs and small interfering RNAs) in plants and animals.
Analysis of small RNA libraries from deep-sequencing data, expression regulation profiling, discovery and annotation novel miRNA gene and their targets, as well as identification of stress-related small RNAs.
BOOKS AND CHAPTERS:
Handbook of Bioinformatics (in bulgarian), University of Plovdiv Press, 2013. Vesselin Baev, Elena Apostolova, Evelina Daskalova, Georgi Minkov
Small RNAs in Crop Response to Temperature Stress Non-coding RNAs in Plants. Handbook of Pant and Crop Physiology, Expanded 3rd Edition, (Galina Yahubyan, Elena Apostolova, Ivan Minkov and Vesselin Baev)
OTHER INTERESTS:
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mobile technologies
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sci-fi movies
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digital photography
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日本語、日本文化。(Japanese language and culture).
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